BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F12SP1|AL425744
(767 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 996 0.0
>3x_Contig1806
Length = 53694
Score = 996 bits (479), Expect = 0.0
Identities = 658/757 (86%)
Strand = Plus / Minus
Query: 1 tgtcttacttctctcgttcatctggcagccactacatgtgcatatgcacaaaatatagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45786 tgtcttacttctctcgttcatctggcagccactacatgtgcatatgcacaaaatatagac 45727
Query: 61 taagcmagtgcgtccagaataaagttttttttttttcattgcatgagggccgaagaattc 120
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45726 taagcaagtgcgttcagaataaagttttttttttttcattgcatgagggccgaagaattc 45667
Query: 121 cctgcagaaaagctggtttcagaaggaggcatcaattatacgggttttgagagaaggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45666 cctgcagaaaagctggtttcagaaggaggcatcaattatacgggttttgagagaaggcac 45607
Query: 181 atttctatgtgatttttgcagattctgtttcccttcctcccttcattaacgtgagayggt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 45606 atttctatgtgatttttgcagattctgtttcccttcctcccttcattaacgtgagatggt 45547
Query: 241 ttcagtggttatatttagtcatctaattgcgaaatcccatcacataaacgaggatgattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45546 ttcagtggttatatttagtcatctaattgcgaaatcccatcacataaacgaggatgattg 45487
Query: 301 acattcgataaaggactcgcagaaagaaggatgcttcaacgctgcacgtgattcttgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 45486 acattcgataaaggactcgcagaaagaaggatgcttcaacgctgcacgtgattattgtgc 45427
Query: 361 acgggtgagccttcggtaccactacctcgtngnaaacttaamttgaagganagggtanaa 420
|||||||||| ||||||||||||||||||| | |||||||| |||||||| | ||| ||
Sbjct: 45426 acgggtgagcattcggtaccactacctcgtagtaaacttaaattgaaggatactgtataa 45367
Query: 421 tgmsaassanstttstasttggtssttgaansagnnassgatsasgtgaatgsktsatss 480
| || | ||| || ||||| ||||| || | ||| | ||||||| | ||
Sbjct: 45366 tcacaaccatctttctacttggtccttgaatcagttaccgatcacgtgaatgcttcatcc 45307
Query: 481 ggatssagggatggatgtgaagttggaasttstgaggaasaggataagkttgtrastaat 540
|||| || ||||||||| |||||| || || ||||||| |||||||| |||| | ||||
Sbjct: 45306 ggatccagcgatggatgtcaagttgcaacttctgaggaacaggataaggttgtaactaat 45247
Query: 541 gtaasattsaataaaksssssaasttgaasttstaaggggaaagttnasagannaastgn 600
|||| ||| |||||| || ||||| || |||| |||||||| | ||| || ||
Sbjct: 45246 gtaacattcaataaagcccccaacttgaacttctaagcggaaagtttacagattaactgt 45187
Query: 601 gaatttakctcaattwatttscatttattttcasacckctscatttscttatcatataaa 660
||| || | ||| |||| ||||||| ||| ||| | ||| | | ||||| | |||
Sbjct: 45186 caatgtagcgcaaggaatttccatttatggtcacaccgcgccatgtccgtatcagagaaa 45127
Query: 661 cttcctttcacttataataactatttttatcttaaaawwatttccttttctttaaaatta 720
|| ||||||||| |||| ||||||| ||||||||||| | ||||||||||| ||||| |
Sbjct: 45126 ctgcctttcactgataagaactattgttatcttaaaaaaagttccttttcttgaaaatga 45067
Query: 721 cctccatatctatcattttasctttttttaacatata 757
|||||||||| ||||| | | | |||| |||||||||
Sbjct: 45066 cctccatatcgatcatgtgaccgttttgtaacatata 45030
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9896
Number of Sequences: 1807
Number of extensions: 9896
Number of successful extensions: 234
Number of sequences better than 1.0e-20: 1
length of query: 767
length of database: 10,358,551
effective HSP length: 16
effective length of query: 751
effective length of database: 10,329,639
effective search space: 7757558889
effective search space used: 7757558889
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.3 bits)